Best TWAS P=2.22e-08 · Best GWAS P=9.69e-07 conditioned to 0.0636
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | The Cancer Genome Atlas | Head and Neck Squamous Cell Carcinoma | C7orf40 | 0.03 | 0.02 | enet | 4 | 0.02 | 2.4e-03 | -4.9 | 5.4 | 5.4e-08 | -0.94 | 0.00 | 0.62 | FALSE |
| 2 | The Cancer Genome Atlas | Lung Squamous Cell Carcinoma | TBRG4 | 0.08 | 0.03 | blup | 61 | 0.03 | 7.5e-05 | -4.3 | -5.6 | 2.2e-08 | 0.61 | 0.02 | 0.71 | TRUE |