[Hub]/) : Traits : Schizophrenia (2014) : ← →

chr1:242,590,540-244,359,621

Best TWAS P=1.83e-10 · Best GWAS P=1e-07 conditioned to 0.189

#	Study	Tissue	Gene	h2	eQTL R2	model	# weights	model R2	model R2 P	eQTL GWAS Z	TWAS Z	TWAS P	Top SNP corr	PP3	PP4	joint
7	NTR	Blood	SDCCAG8	0.03	0.01	blup	356	0.01	1.4e-04	-3.6	-6.4	1.8e-10	0.46	0.38	0.59	TRUE
1	CommonMind	Brain Pre-frontal Cortex	CEP170	0.05	0.02	bslmm	378	0.03	1.9e-04	-2.9	5.9	4.4e-09	-0.62	0.22	0.39	TRUE
5	GTEx	Cells EBV-transformed lymphocytes	SDCCAG8	0.36	0.24	lasso	8	0.34	5.7e-12	-5.3	-5.6	1.7e-08	0.88	0.02	0.98	FALSE
2	CommonMind	Brain Pre-frontal Cortex	SDCCAG8	0.13	0.10	enet	32	0.11	5.6e-13	-4.8	5.5	3.6e-08	-0.63	0.09	0.90	FALSE
3	GTEx	Breast Mammary Tissue	SDCCAG8	0.15	0.04	enet	13	0.09	2.8e-05	-3.6	-5.4	8.0e-08	0.50	0.04	0.94	FALSE
8	The Cancer Genome Atlas	Pancreatic Adenocarcinoma	CEP170	0.08	0.06	enet	7	0.06	2.0e-03	-5.0	-5.3	1.1e-07	0.58	0.01	0.75	FALSE
4	GTEx	Breast Mammary Tissue (Female)	SDCCAG8	0.17	0.07	enet	15	0.06	5.5e-03	-4.2	-5.3	1.3e-07	0.55	0.06	0.64	FALSE
9	The Cancer Genome Atlas	Pancreatic Adenocarcinoma	SDCCAG8	0.19	0.18	lasso	5	0.16	1.9e-07	-5.1	-5.3	1.3e-07	0.78	0.03	0.97	FALSE
6	GTEx	Cells Transformed fibroblasts	RP11-261C10.5	0.15	0.13	lasso	2	0.14	2.2e-10	-5.2	-5.2	1.6e-07	0.63	0.02	0.98	FALSE