[Hub]/) : Traits : Schizophrenia (2014) : ← →

chr1:242,590,540-244,359,621

Best TWAS P=1.83e-10 · Best GWAS P=1e-07 conditioned to 0.189

Associated models

# Study Tissue Gene h2 eQTL R2 model # weights model R2 model R2 P eQTL GWAS Z TWAS Z TWAS P Top SNP corr PP3 PP4 joint
1 CommonMind Brain Pre-frontal Cortex CEP170 0.05 0.02 bslmm 378 0.03 1.9e-04 -2.9 5.9 4.4e-09 -0.62 0.22 0.39 TRUE
2 CommonMind Brain Pre-frontal Cortex SDCCAG8 0.13 0.10 enet 32 0.11 5.6e-13 -4.8 5.5 3.6e-08 -0.63 0.09 0.90 FALSE
3 GTEx Breast Mammary Tissue SDCCAG8 0.15 0.04 enet 13 0.09 2.8e-05 -3.6 -5.4 8.0e-08 0.50 0.04 0.94 FALSE
4 GTEx Breast Mammary Tissue (Female) SDCCAG8 0.17 0.07 enet 15 0.06 5.5e-03 -4.2 -5.3 1.3e-07 0.55 0.06 0.64 FALSE
5 GTEx Cells EBV-transformed lymphocytes SDCCAG8 0.36 0.24 lasso 8 0.34 5.7e-12 -5.3 -5.6 1.7e-08 0.88 0.02 0.98 FALSE
6 GTEx Cells Transformed fibroblasts RP11-261C10.5 0.15 0.13 lasso 2 0.14 2.2e-10 -5.2 -5.2 1.6e-07 0.63 0.02 0.98 FALSE
7 NTR Blood SDCCAG8 0.03 0.01 blup 356 0.01 1.4e-04 -3.6 -6.4 1.8e-10 0.46 0.38 0.59 TRUE
8 The Cancer Genome Atlas Pancreatic Adenocarcinoma CEP170 0.08 0.06 enet 7 0.06 2.0e-03 -5.0 -5.3 1.1e-07 0.58 0.01 0.75 FALSE
9 The Cancer Genome Atlas Pancreatic Adenocarcinoma SDCCAG8 0.19 0.18 lasso 5 0.16 1.9e-07 -5.1 -5.3 1.3e-07 0.78 0.03 0.97 FALSE