Best TWAS P=1.88e-07 · Best GWAS P=1.29e-06 conditioned to 0.639
# | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | GTEx | Prostate | RP11-295M18.6 | 0.44 | 0.16 | lasso | 11 | 0.12 | 7.5e-04 | 3.6 | 5.2 | 2.6e-07 | 0.83 | 0 | 0.83 | FALSE |
2 | GTEx | Whole Blood | RP11-295M18.6 | 0.11 | 0.08 | lasso | 6 | 0.07 | 3.7e-07 | 4.8 | 5.2 | 1.9e-07 | 0.89 | 0 | 0.99 | TRUE |