[Hub]/) : Traits : Sitting height : ← →

chr6:44,079,216-46,043,561

Best TWAS P=2.93e-30 · Best GWAS P=3.46e-31 conditioned to 0.00234

Associated models

#	Study	Tissue	Gene	h2	eQTL R2	model	# weights	model R2	model R2 P	eQTL GWAS Z	TWAS Z	TWAS P	Top SNP corr	PP3	PP4	joint
1	CommonMind	Brain Pre-frontal Cortex	SUPT3H	0.33	0.26	enet	43	0.44	2.5e-59	-5.1	-6.8	1.1e-11	-0.60	1.00	0.00	FALSE
2	GTEx	Adipose Visceral Omentum	SUPT3H	0.27	0.10	lasso	7	0.06	3.4e-04	10.9	-11.4	2.9e-30	-0.91	0.02	0.98	TRUE
3	GTEx	Artery Tibial	SUPT3H	0.13	0.01	enet	21	0.02	1.9e-02	-5.0	-8.9	3.8e-19	-0.64	0.08	0.88	FALSE
4	GTEx	Brain Cortex	SUPT3H	0.28	0.01	lasso	7	0.01	2.1e-01	-5.3	-5.2	2.1e-07	-0.56	0.21	0.26	FALSE
5	GTEx	Cells EBV-transformed lymphocytes	SUPT3H	0.20	0.08	lasso	6	0.10	3.0e-04	10.8	-9.8	1.6e-22	-0.83	0.20	0.53	FALSE
6	GTEx	Cells Transformed fibroblasts	SUPT3H	0.15	0.10	lasso	4	0.13	8.8e-10	10.9	-8.7	4.7e-18	-0.86	0.06	0.94	FALSE
7	GTEx	Esophagus Gastroesophageal Junction	SUPT3H	0.27	0.01	lasso	3	0.00	2.7e-01	-7.2	-7.1	1.1e-12	-0.48	0.09	0.31	FALSE
8	GTEx	Esophagus Mucosa	SUPT3H	0.08	0.09	lasso	3	0.08	6.4e-06	10.9	-11.1	7.2e-29	-0.93	0.02	0.98	FALSE
9	GTEx	Esophagus Muscularis	SUPT3H	0.10	0.03	enet	20	0.02	1.3e-02	-7.2	-7.0	1.8e-12	-0.57	0.14	0.42	FALSE
10	GTEx	Lung	SUPT3H	0.10	0.06	enet	21	0.03	1.3e-03	10.7	-10.7	6.4e-27	-0.84	0.07	0.92	FALSE
11	GTEx	Nerve Tibial	SUPT3H	0.17	0.12	lasso	5	0.10	2.2e-07	10.7	-10.8	5.7e-27	-0.96	0.04	0.96	FALSE
12	GTEx	Pancreas	SUPT3H	0.11	0.07	lasso	2	0.05	3.6e-03	11.3	-11.3	1.5e-29	-0.98	0.02	0.95	FALSE
13	GTEx	Pituitary	SUPT3H	0.26	0.08	lasso	6	0.05	1.8e-02	-5.1	-5.7	1.6e-08	-0.59	0.09	0.25	FALSE
14	GTEx	Skin Sun Exposed Lower leg	SUPT3H	0.07	0.03	lasso	5	0.04	4.2e-04	10.7	-9.6	1.0e-21	-0.85	0.04	0.92	FALSE
15	GTEx	Spleen	SUPT3H	0.32	0.06	enet	12	0.11	9.5e-04	10.0	-10.8	3.4e-27	-0.80	0.13	0.63	FALSE
16	GTEx	Testis	SUPT3H	0.30	0.16	lasso	7	0.17	6.7e-08	-4.7	-6.2	7.7e-10	-0.59	0.81	0.19	FALSE
17	GTEx	Thyroid	SUPT3H	0.29	0.07	lasso	8	0.07	7.3e-06	-5.6	-7.0	1.9e-12	-0.37	0.51	0.46	FALSE
18	METSIM	Adipose	SUPT3H	0.11	0.04	bslmm	657	0.06	2.7e-09	10.8	-7.4	1.7e-13	-0.70	0.12	0.88	FALSE
19	NTR	Blood	SUPT3H	0.03	0.02	lasso	7	0.02	1.9e-07	-6.8	-8.1	7.5e-16	-0.78	0.97	0.03	FALSE
20	ROSMAP	Brain Pre-frontal Cortex	SUPT3H	0.15	0.13	blup	643	0.17	3.4e-21	-4.6	-5.3	1.2e-07	-0.65	1.00	0.00	FALSE
21	YFS	Blood	SUPT3H	0.06	0.09	lasso	13	0.12	2.2e-36	10.7	-9.4	8.0e-21	-0.89	0.18	0.82	FALSE
22	The Cancer Genome Atlas	Breast Invasive Carcinoma	SUPT3H	0.02	0.01	blup	191	0.01	3.0e-03	10.9	-10.6	2.4e-26	-0.94	0.03	0.96	FALSE
23	The Cancer Genome Atlas	Colon Adenocarcinoma	SUPT3H	0.08	0.01	blup	191	0.05	1.0e-03	10.9	-10.9	8.3e-28	-0.83	0.02	0.93	FALSE
24	The Cancer Genome Atlas	Head and Neck Squamous Cell Carcinoma	SUPT3H	0.04	0.01	blup	191	0.02	6.5e-03	-5.1	-9.0	2.9e-19	-0.83	0.04	0.94	FALSE
25	The Cancer Genome Atlas	Brain Lower Grade Glioma	SUPT3H	0.07	0.05	enet	12	0.08	1.1e-09	-4.7	-9.1	8.3e-20	-0.84	0.19	0.81	FALSE
26	The Cancer Genome Atlas	Lung Adenocarcinoma	SUPT3H	0.03	0.03	lasso	2	0.02	8.9e-04	10.9	-10.7	6.8e-27	-0.92	0.06	0.81	FALSE
27	The Cancer Genome Atlas	Pheochromocytoma and Paraganglioma	SUPT3H	0.12	0.08	blup	191	0.09	2.8e-04	11.1	-11.4	5.9e-30	-0.92	0.04	0.95	FALSE
28	The Cancer Genome Atlas	Stomach Adenocarcinoma	SUPT3H	0.05	0.01	blup	191	0.00	1.4e-01	-4.1	-8.2	2.1e-16	-0.77	0.10	0.26	FALSE
29	The Cancer Genome Atlas	Thyroid Carcinoma	SUPT3H	0.06	0.04	lasso	4	0.05	2.1e-05	10.8	-11.1	1.3e-28	-0.87	0.05	0.94	FALSE