TWAS
hub
About
Usage
Models
Genes
Traits
[Hub]/) :
Traits
:
Body mass index (BMI)
:
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chr3:14,947,539-16,612,886
Best TWAS P=1e-08 · Best GWAS P=3.44e-09 conditioned to 0.00094
15M
15.2M
15.4M
15.6M
15.8M
16M
16.2M
16.4M
16.6M
0
2
4
6
8
physical position
-log10 P
Conditional
▼
Associated models
#
Study
Tissue
Gene
h2
eQTL R2
model
# weights
model R2
model R2 P
eQTL GWAS Z
TWAS Z
TWAS P
Top SNP corr
PP3
PP4
joint
2
ROSMAP
Brain Pre-frontal Cortex
AC090945.1
0.10
0.12
lasso
7
0.11
2.8e-14
5.4
5.7
1.0e-08
-0.55
0.04
0.95
TRUE
3
The Cancer Genome Atlas
Kidney Renal Papillary Cell Carcinoma
BTD
0.07
0.04
enet
9
0.04
1.6e-03
-5.9
5.7
1.5e-08
-0.81
0.00
0.87
FALSE
4
The Cancer Genome Atlas
Prostate Adenocarcinoma
BTD
0.04
0.02
lasso
3
0.02
6.5e-03
5.3
5.5
3.6e-08
-0.63
0.01
0.69
FALSE
1
ROSMAP
Brain Pre-frontal Cortex
BTD
0.07
0.09
lasso
3
0.07
1.2e-09
5.2
5.4
8.5e-08
-0.55
0.09
0.91
FALSE
5
The Cancer Genome Atlas
Thyroid Carcinoma
BTD
0.08
0.12
lasso
4
0.10
5.0e-10
4.8
5.1
2.7e-07
-0.47
0.20
0.80
FALSE