Best TWAS P=3.71e-09 · Best GWAS P=8.78e-14 conditioned to 2.27e-10
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | GTEx | Small Intestine Terminal Ileum | FIGNL1 | 0.21 | 0.23 | lasso | 4 | 0.22 | 1.3e-05 | -6.5 | -5.9 | 3.7e-09 | -0.21 | 0.24 | 0.13 | TRUE |
| 2 | The Cancer Genome Atlas | Stomach Adenocarcinoma | FIGNL1 | 0.05 | 0.00 | blup | 68 | 0.01 | 5.4e-02 | -6.6 | -5.2 | 2.2e-07 | -0.08 | 0.00 | 0.76 | FALSE |