Best TWAS P=1.3e-09 · Best GWAS P=5.7e-07 conditioned to 0.0101
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | GTEx | Brain Cerebellar Hemisphere | PMS2P1 | 0.14 | 0.02 | enet | 11 | 0.06 | 1.3e-02 | -3.8 | 5.4 | 5.3e-08 | -0.65 | 0.03 | 0.34 | FALSE |
| 2 | GTEx | Cells EBV-transformed lymphocytes | LAMTOR4 | 0.40 | 0.19 | enet | 39 | 0.21 | 2.2e-07 | -4.1 | 6.1 | 1.3e-09 | -0.44 | 0.13 | 0.58 | TRUE |
| 3 | GTEx | Vagina | TRIM4 | 0.32 | 0.19 | lasso | 7 | 0.27 | 6.0e-07 | -4.0 | 5.1 | 2.8e-07 | -0.57 | 0.12 | 0.46 | FALSE |