Best TWAS P=5.37e-08 · Best GWAS P=1.87e-12 conditioned to 7.47e-06
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | GTEx | Cells Transformed fibroblasts | JPH2 | 0.21 | 0.06 | enet | 45 | 0.07 | 5.1e-06 | 4.2 | -5.4 | 5.4e-08 | 0.16 | 0.40 | 0.16 | TRUE |
| 2 | The Cancer Genome Atlas | Kidney Renal Papillary Cell Carcinoma | JPH2 | 0.09 | 0.00 | blup | 127 | 0.00 | 1.6e-01 | 4.0 | -5.2 | 2.3e-07 | 0.42 | 0.04 | 0.12 | TRUE |