TWAS
hub
About
Usage
Models
Genes
Traits
[Hub]/) :
Traits
:
Impedance of leg (left)
:
←
→
chr20:42,040,938-43,508,687
Best TWAS P=5.37e-08 · Best GWAS P=1.87e-12 conditioned to 7.47e-06
42M
42.2M
42.4M
42.6M
42.8M
43M
43.2M
43.4M
0
2
4
6
8
10
12
physical position
-log10 P
Marginal
▼
Associated models
#
Study
Tissue
Gene
h2
eQTL R2
model
# weights
model R2
model R2 P
eQTL GWAS Z
TWAS Z
TWAS P
Top SNP corr
PP3
PP4
joint
1
GTEx
Cells Transformed fibroblasts
JPH2
0.21
0.06
enet
45
0.07
5.1e-06
4.2
-5.4
5.4e-08
0.16
0.40
0.16
TRUE
2
The Cancer Genome Atlas
Kidney Renal Papillary Cell Carcinoma
JPH2
0.09
0.00
blup
127
0.00
1.6e-01
4.0
-5.2
2.3e-07
0.42
0.04
0.12
TRUE