Best TWAS P=1.11e-09 · Best GWAS P=1.63e-11 conditioned to 2.12e-07
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | GTEx | Nerve Tibial | GFPT1 | 0.13 | 0.01 | lasso | 4 | 0.02 | 1.8e-02 | -3.1 | 5.6 | 2.4e-08 | 0.29 | 0.23 | 0.15 | FALSE |
| 2 | METSIM | Adipose | GFPT1 | 0.07 | 0.06 | blup | 460 | 0.08 | 1.0e-11 | -3.1 | 6.1 | 1.1e-09 | 0.29 | 1.00 | 0.00 | TRUE |