TWAS
hub
About
Usage
Models
Genes
Traits
[Hub]/) :
Traits
:
Leg fat percentage (left)
:
←
→
chr3:70,757,099-71,880,670
Best TWAS P=1.74e-07 · Best GWAS P=1.8e-07 conditioned to 0.09
70.8M
71M
71.2M
71.4M
71.6M
71.8M
0
2
4
6
physical position
-log10 P
Marginal
▼
Associated models
#
Study
Tissue
Gene
h2
eQTL R2
model
# weights
model R2
model R2 P
eQTL GWAS Z
TWAS Z
TWAS P
Top SNP corr
PP3
PP4
joint
1
The Cancer Genome Atlas
Soft Tissue Sarcoma
FOXP1
0.17
0.09
lasso
5
0.06
3e-04
-5.1
5.2
1.7e-07
-0.81
0
0.97
TRUE