Best TWAS P=3.79e-10 · Best GWAS P=1.68e-12 conditioned to 1.59e-06
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | GTEx | Prostate | FIGNL1 | 0.52 | 0.29 | enet | 13 | 0.40 | 2.6e-11 | -6.8 | -5.1 | 2.9e-07 | -0.29 | 0.05 | 0.95 | FALSE |
| 2 | GTEx | Small Intestine Terminal Ileum | FIGNL1 | 0.21 | 0.23 | lasso | 4 | 0.22 | 1.3e-05 | -6.8 | -6.3 | 3.8e-10 | -0.44 | 0.07 | 0.75 | TRUE |
| 3 | The Cancer Genome Atlas | Stomach Adenocarcinoma | FIGNL1 | 0.05 | 0.00 | blup | 68 | 0.01 | 5.4e-02 | -6.7 | -5.2 | 2.4e-07 | -0.18 | 0.00 | 0.76 | FALSE |