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Traits
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Leg fat-free mass (left)
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chr19:29,606,361-31,013,761
Best TWAS P=1.74e-20 · Best GWAS P=6.52e-22 conditioned to 0.004
29.6M
29.8M
30M
30.2M
30.4M
30.6M
30.8M
31M
0
5
10
15
20
physical position
-log10 P
Marginal
▼
Associated models
#
Study
Tissue
Gene
h2
eQTL R2
model
# weights
model R2
model R2 P
eQTL GWAS Z
TWAS Z
TWAS P
Top SNP corr
PP3
PP4
joint
4
The Cancer Genome Atlas
Brain Lower Grade Glioma
CCNE1
0.03
0.03
enet
5
0.03
3.2e-04
9.5
-9.3
1.7e-20
-0.91
0
0.99
TRUE
3
The Cancer Genome Atlas
Bladder Urothelial Carcinoma
CCNE1
0.03
0.02
blup
39
0.02
4.5e-03
9.5
9.1
7.0e-20
0.90
0
0.97
FALSE
2
GTEx
Skin Sun Exposed Lower leg
CCNE1
0.27
0.22
lasso
8
0.24
2.5e-19
9.5
8.8
8.8e-19
0.93
0
1.00
FALSE
1
GTEx
Skin Not Sun Exposed Suprapubic
CCNE1
0.31
0.19
lasso
9
0.21
6.3e-12
9.6
8.8
1.3e-18
0.94
0
1.00
FALSE