Best TWAS P=2.52e-07 · Best GWAS P=1.43e-08 conditioned to 5.07e-06
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | GTEx | Brain Nucleus accumbens basal ganglia | PTPN2 | 0.32 | 0.02 | lasso | 10 | 0.05 | 0.022 | 4.7 | 5.2 | 2.5e-07 | 0.24 | 0.09 | 0.18 | TRUE |