Best TWAS P=1.01e-07 · Best GWAS P=4.21e-10 conditioned to 0.000193
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | GTEx | Muscle Skeletal | CRIPT | 0.14 | 0.05 | enet | 25 | 0.08 | 1.8e-08 | -3.7 | -5.1 | 2.7e-07 | 0.57 | 0.96 | 0.03 | FALSE |
| 2 | The Cancer Genome Atlas | Colon Adenocarcinoma | CRIPT | 0.10 | 0.06 | blup | 66 | 0.07 | 5.6e-05 | -3.6 | -5.3 | 1.0e-07 | 0.63 | 0.47 | 0.24 | TRUE |