TWAS
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Traits
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Arm fat percentage (right)
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chr2:46,145,610-47,543,245
Best TWAS P=1.01e-07 · Best GWAS P=4.21e-10 conditioned to 0.000193
46.2M
46.4M
46.6M
46.8M
47M
47.2M
47.4M
47.6M
0
2
4
6
8
10
physical position
-log10 P
Marginal
▼
Associated models
#
Study
Tissue
Gene
h2
eQTL R2
model
# weights
model R2
model R2 P
eQTL GWAS Z
TWAS Z
TWAS P
Top SNP corr
PP3
PP4
joint
2
The Cancer Genome Atlas
Colon Adenocarcinoma
CRIPT
0.10
0.06
blup
66
0.07
5.6e-05
-3.6
-5.3
1.0e-07
0.63
0.47
0.24
TRUE
1
GTEx
Muscle Skeletal
CRIPT
0.14
0.05
enet
25
0.08
1.8e-08
-3.7
-5.1
2.7e-07
0.57
0.96
0.03
FALSE