[Hub]/) : Traits : Arm fat-free mass (left) : ← →

chr9:138,562,710-140,321,666

Best TWAS P=2.72e-10 · Best GWAS P=5.99e-08 conditioned to 0.356

Associated models

#	Study	Tissue	Gene	h2	eQTL R2	model	# weights	model R2	model R2 P	eQTL GWAS Z	TWAS Z	TWAS P	Top SNP corr	PP3	PP4	joint
1	GTEx	Adrenal Gland	INPP5E	0.18	0.02	enet	23	0.10	2.2e-04	4.7	-5.2	2.3e-07	-0.63	0.08	0.64	FALSE
2	GTEx	Brain Caudate basal ganglia	SNHG7	0.37	0.10	lasso	6	0.27	2.5e-08	-3.2	6.2	6.2e-10	0.34	0.08	0.57	TRUE
3	GTEx	Brain Cerebellar Hemisphere	INPP5E	0.25	0.23	enet	6	0.17	3.4e-05	4.7	-5.3	1.2e-07	-0.75	0.11	0.83	FALSE
4	GTEx	Esophagus Muscularis	SDCCAG3	0.10	0.02	enet	5	0.02	3.6e-02	3.3	-5.1	3.1e-07	-0.46	0.08	0.70	FALSE
5	GTEx	Lung	CARD9	0.08	0.04	enet	6	0.04	2.5e-04	5.4	5.3	1.5e-07	0.88	0.02	0.98	FALSE
6	GTEx	Ovary	INPP5E	0.24	0.13	enet	11	0.15	1.9e-04	5.0	-6.3	2.7e-10	-0.79	0.05	0.68	TRUE
7	GTEx	Ovary	SEC16A	0.33	0.06	enet	10	0.14	3.4e-04	4.6	-5.6	1.6e-08	-0.65	0.04	0.34	FALSE
8	GTEx	Uterus	INPP5E	0.60	0.04	enet	10	0.22	3.4e-05	5.3	-5.5	3.5e-08	-0.73	0.05	0.55	FALSE
9	GTEx	Whole Blood	SEC16A	0.07	0.05	lasso	5	0.04	1.3e-04	4.8	-5.4	6.7e-08	-0.62	0.10	0.89	FALSE
10	GTEx	Whole Blood	CARD9	0.08	0.07	lasso	1	0.05	4.2e-05	5.4	5.4	8.3e-08	0.98	0.02	0.98	FALSE
11	YFS	Blood	INPP5E	0.33	0.55	lasso	6	0.57	2.9e-235	5.3	-5.3	1.5e-07	-0.70	0.04	0.96	FALSE
12	The Cancer Genome Atlas	Cervical Squamous Cell Carcinoma	INPP5E	0.25	0.10	lasso	3	0.09	4.9e-05	5.3	-5.5	4.0e-08	-0.70	0.01	0.96	FALSE
13	The Cancer Genome Atlas	Colon Adenocarcinoma	INPP5E	0.11	0.08	lasso	2	0.08	3.4e-05	5.3	-5.3	1.2e-07	-0.71	0.01	0.92	FALSE
14	The Cancer Genome Atlas	Kidney Renal Papillary Cell Carcinoma	INPP5E	0.07	0.04	blup	54	0.07	6.0e-05	5.4	-5.8	8.8e-09	-0.81	0.01	0.95	FALSE
15	The Cancer Genome Atlas	Kidney Renal Papillary Cell Carcinoma	SDCCAG3	0.05	0.01	blup	61	0.01	5.9e-02	5.1	-5.2	2.3e-07	-0.84	0.02	0.67	FALSE
16	The Cancer Genome Atlas	Prostate Adenocarcinoma	SEC16A	0.08	0.10	lasso	4	0.08	1.9e-08	5.4	-5.2	2.1e-07	-0.57	0.00	1.00	FALSE
17	The Cancer Genome Atlas	Testicular Germ Cell Tumors	INPP5E	0.10	0.06	blup	54	0.08	8.1e-04	4.7	-5.4	6.2e-08	-0.82	0.03	0.75	FALSE
18	The Cancer Genome Atlas	Thyroid Carcinoma	INPP5E	0.11	0.16	lasso	3	0.16	2.4e-15	5.1	-5.2	1.6e-07	-0.82	0.03	0.96	FALSE