Best TWAS P=2.97e-08 · Best GWAS P=0.00093 conditioned to 0.000817
# | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | GTEx | Esophagus Muscularis | RP1-283E3.4 | 0.46 | 0.14 | enet | 23 | 0.24 | 1.6e-14 | -2.8 | -5.5 | 3e-08 | -0.01 | 0 | 0.06 | TRUE |
2 | GTEx | Thyroid | RP1-283E3.4 | 0.59 | 0.04 | lasso | 10 | 0.22 | 3.8e-17 | -2.8 | -5.2 | 2e-07 | -0.03 | 0 | 0.04 | FALSE |