Best TWAS P=2.44e-08 · Best GWAS P=1.67e-09 conditioned to 0.0102
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | GTEx | Thyroid | BAI2 | 0.31 | 0.23 | lasso | 6 | 0.22 | 1.4e-16 | 5.5 | 5.6 | 2.4e-08 | 0.81 | 0.04 | 0.96 | TRUE |
| 2 | The Cancer Genome Atlas | Lung Adenocarcinoma | COL16A1 | 0.04 | 0.03 | lasso | 4 | 0.03 | 5.2e-04 | 5.7 | -5.2 | 2.3e-07 | -0.82 | 0.01 | 0.91 | FALSE |