[Hub]/) : Traits : Trunk fat-free mass :

chr5:126,587,995-128,220,643

Best TWAS P=4.58e-14 · Best GWAS P=8.19e-13 conditioned to 0.681

Associated models

# Study Tissue Gene h2 eQTL R2 model # weights model R2 model R2 P eQTL GWAS Z TWAS Z TWAS P Top SNP corr PP3 PP4 joint
1 GTEx Adipose Subcutaneous CTC-228N24.3 0.24 0.15 enet 16 0.20 3.4e-16 7.2 -6.4 1.8e-10 -0.97 0.00 1.00 FALSE
2 GTEx Adipose Visceral Omentum CTC-228N24.3 0.24 0.16 enet 19 0.16 1.8e-08 7.2 -6.7 1.8e-11 -0.80 0.00 1.00 FALSE
3 GTEx Adrenal Gland CTC-228N24.3 0.34 0.10 lasso 9 0.09 4.2e-04 5.1 -5.9 3.9e-09 -0.88 0.02 0.96 FALSE
4 GTEx Artery Aorta CTC-228N24.3 0.20 0.04 lasso 8 0.07 7.4e-05 4.4 -6.3 3.0e-10 -0.91 0.10 0.87 FALSE
5 GTEx Artery Coronary CTC-228N24.3 0.31 0.10 lasso 3 0.10 2.9e-04 6.7 -7.1 1.3e-12 -0.86 0.01 0.90 FALSE
6 GTEx Artery Tibial CTC-228N24.3 0.20 0.16 lasso 7 0.14 3.0e-11 7.2 -7.4 1.3e-13 -0.99 0.00 1.00 FALSE
7 GTEx Brain Cerebellum CTC-228N24.3 0.31 0.04 lasso 5 0.12 2.9e-04 7.2 -6.1 1.2e-09 -0.84 0.01 0.97 FALSE
8 GTEx Cells Transformed fibroblasts CTC-228N24.3 0.24 0.16 enet 26 0.16 8.6e-12 7.2 -7.5 5.9e-14 -0.89 0.00 1.00 FALSE
9 GTEx Colon Sigmoid CTC-228N24.3 0.20 0.22 enet 11 0.23 1.1e-08 6.7 -6.8 1.3e-11 -0.92 0.01 0.99 FALSE
10 GTEx Esophagus Mucosa CTC-228N24.3 0.18 0.14 enet 11 0.14 9.8e-10 7.2 -7.5 4.6e-14 -0.93 0.00 1.00 TRUE
11 GTEx Heart Left Ventricle CTC-228N24.3 0.24 0.15 lasso 7 0.19 1.9e-10 6.1 -5.4 5.9e-08 -0.84 0.01 0.99 FALSE
12 GTEx Lung CTC-228N24.3 0.18 0.14 enet 16 0.14 3.2e-11 7.2 -5.8 5.9e-09 -0.95 0.00 1.00 FALSE
13 GTEx Muscle Skeletal CTC-228N24.3 0.25 0.20 lasso 5 0.21 1.6e-20 7.2 -6.3 4.1e-10 -0.95 0.00 1.00 FALSE
14 GTEx Nerve Tibial CTC-228N24.3 0.32 0.18 lasso 10 0.16 1.6e-11 6.7 -6.9 3.7e-12 -0.96 0.01 0.99 FALSE
15 GTEx Pancreas CTC-228N24.3 0.14 0.19 lasso 2 0.17 1.1e-07 7.2 -7.2 8.2e-13 -1.00 0.00 1.00 FALSE
16 GTEx Skin Not Sun Exposed Suprapubic CTC-228N24.3 0.29 0.21 lasso 7 0.22 1.7e-12 7.2 -7.3 2.9e-13 -0.97 0.00 1.00 FALSE
17 GTEx Skin Sun Exposed Lower leg CTC-228N24.3 0.29 0.17 enet 12 0.22 4.3e-18 6.6 -7.1 9.7e-13 -0.90 0.00 1.00 FALSE
18 GTEx Spleen CTC-228N24.3 0.26 0.03 enet 15 0.05 1.8e-02 4.4 -5.9 2.8e-09 -0.66 0.04 0.56 FALSE
19 GTEx Stomach SLC12A2 0.23 0.17 enet 19 0.17 1.6e-08 5.6 -5.6 2.3e-08 -0.45 0.79 0.17 FALSE
20 GTEx Stomach CTC-228N24.3 0.17 0.04 lasso 6 0.08 1.5e-04 6.1 -7.0 2.9e-12 -0.81 0.02 0.96 FALSE
21 GTEx Testis CTC-228N24.3 0.30 0.16 lasso 6 0.14 1.1e-06 7.2 -6.7 2.2e-11 -0.93 0.00 1.00 FALSE
22 METSIM Adipose CTC-228N24.3 0.17 0.19 lasso 6 0.18 1.9e-26 7.2 -7.1 1.5e-12 -1.00 0.00 1.00 FALSE
23 ROSMAP Brain Pre-frontal Cortex CTC-228N24.3 0.15 0.09 lasso 3 0.12 8.0e-15 7.2 -6.1 7.8e-10 -0.88 0.00 1.00 FALSE
24 The Cancer Genome Atlas Breast Invasive Carcinoma FLJ33630 0.05 0.04 enet 14 0.03 2.1e-07 7.2 -7.1 1.1e-12 -0.88 0.00 1.00 FALSE
25 The Cancer Genome Atlas Glioblastoma Multiforme FLJ33630 0.38 0.20 lasso 5 0.17 6.5e-06 7.2 -7.1 1.4e-12 -0.99 0.00 1.00 FALSE
26 The Cancer Genome Atlas Head and Neck Squamous Cell Carcinoma FLJ33630 0.10 0.07 lasso 3 0.08 7.0e-09 6.7 -6.5 7.8e-11 -0.95 0.00 1.00 FALSE
27 The Cancer Genome Atlas Brain Lower Grade Glioma FLJ33630 0.19 0.16 enet 4 0.16 1.2e-17 7.2 -7.1 1.7e-12 -1.00 0.00 1.00 FALSE
28 The Cancer Genome Atlas Lung Adenocarcinoma FLJ33630 0.07 0.05 lasso 1 0.04 1.3e-05 6.7 -6.7 2.8e-11 -0.96 0.01 0.99 FALSE
29 The Cancer Genome Atlas Lung Squamous Cell Carcinoma FLJ33630 0.09 0.08 lasso 4 0.09 4.9e-10 7.2 -7.1 1.1e-12 -1.00 0.00 1.00 FALSE
30 The Cancer Genome Atlas Pancreatic Adenocarcinoma FLJ33630 0.08 0.03 lasso 2 0.04 5.7e-03 6.7 -7.3 2.6e-13 -0.90 0.01 0.88 FALSE
31 The Cancer Genome Atlas Prostate Adenocarcinoma FLJ33630 0.08 0.05 blup 70 0.04 4.4e-05 6.7 -7.2 6.0e-13 -0.86 0.00 1.00 FALSE
32 The Cancer Genome Atlas Stomach Adenocarcinoma FLJ33630 0.07 0.02 blup 70 0.02 1.5e-02 5.1 -5.9 3.2e-09 -0.48 0.12 0.14 FALSE
33 The Cancer Genome Atlas Testicular Germ Cell Tumors FLJ33630 0.26 0.14 lasso 3 0.13 2.2e-05 7.2 -7.3 3.7e-13 -0.99 0.00 1.00 FALSE
34 The Cancer Genome Atlas Thyroid Carcinoma FLJ33630 0.10 0.10 lasso 2 0.09 5.3e-09 7.2 -7.1 9.2e-13 -1.00 0.00 1.00 FALSE