TWAS
hub
About
Usage
Models
Genes
Traits
[Hub]/) :
Traits
:
Hip circumference
:
→
chr1:752,566-2,362,827
Best TWAS P=2.53e-08 · Best GWAS P=2.79e-07 conditioned to 0.0191
0.8M
1M
1.2M
1.4M
1.6M
1.8M
2M
2.2M
2.4M
0
2
4
6
physical position
-log10 P
Marginal
▼
Associated models
#
Study
Tissue
Gene
h2
eQTL R2
model
# weights
model R2
model R2 P
eQTL GWAS Z
TWAS Z
TWAS P
Top SNP corr
PP3
PP4
joint
1
GTEx
Adipose Visceral Omentum
RP1-283E3.4
0.26
0.05
enet
25
0.16
1.5e-08
-3.2
-5.6
2.5e-08
-0.27
0.09
0.14
TRUE
2
GTEx
Brain Cerebellar Hemisphere
RP5-890O3.9
0.24
0.02
lasso
9
0.02
1.3e-01
-4.8
5.2
2.2e-07
0.28
0.02
0.38
TRUE
3
GTEx
Esophagus Mucosa
RP1-283E3.4
0.53
0.12
enet
20
0.22
4.1e-15
-3.2
-5.4
5.6e-08
-0.19
0.62
0.05
FALSE
4
GTEx
Esophagus Muscularis
RP1-283E3.4
0.46
0.14
enet
23
0.24
1.6e-14
-3.2
-5.4
7.5e-08
-0.24
0.59
0.07
FALSE