TWAS
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Models
Genes
Traits
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Traits
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Hip circumference
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chr2:85,083,503-86,483,021
Best TWAS P=5.27e-08 · Best GWAS P=6.2e-07 conditioned to 0.162
85.2M
85.4M
85.6M
85.8M
86M
86.2M
86.4M
0
1
2
3
4
5
6
physical position
-log10 P
Marginal
▼
Associated models
#
Study
Tissue
Gene
h2
eQTL R2
model
# weights
model R2
model R2 P
eQTL GWAS Z
TWAS Z
TWAS P
Top SNP corr
PP3
PP4
joint
2
GTEx
Skin Not Sun Exposed Suprapubic
GGCX
0.13
0.04
enet
11
0.06
3.9e-04
4.4
5.4
5.3e-08
0.74
0.01
0.91
TRUE
1
GTEx
Artery Tibial
GGCX
0.29
0.22
enet
14
0.24
6.3e-19
4.5
5.3
1.1e-07
0.85
0.02
0.95
FALSE
3
The Cancer Genome Atlas
Prostate Adenocarcinoma
GGCX
0.04
0.02
blup
44
0.02
2.7e-03
3.7
5.1
2.9e-07
0.72
0.03
0.74
FALSE