Best TWAS P=1.09e-07 · Best GWAS P=7.65e-07 conditioned to 0.000207
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | The Cancer Genome Atlas | Brain Lower Grade Glioma | SNRPF | 0.12 | 0.02 | lasso | 3 | 0.03 | 0.00013 | -3.7 | -5.1 | 2.8e-07 | 0.20 | 0 | 0.08 | FALSE |
| 2 | The Cancer Genome Atlas | Thyroid Carcinoma | SNRPF | 0.09 | 0.02 | lasso | 2 | 0.01 | 0.08420 | -3.7 | -5.3 | 1.1e-07 | 0.26 | 0 | 0.02 | TRUE |