TWAS
hub
About
Usage
Models
Genes
Traits
[Hub]/) :
Traits
:
Blood Platelet Count
:
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chr7:22,154,454-23,594,050
Best TWAS P=2.15e-08 · Best GWAS P=3.81e-08 conditioned to 0.0922
22.2M
22.4M
22.6M
22.8M
23M
23.2M
23.4M
23.6M
0
2
4
6
physical position
-log10 P
Marginal
▼
Associated models
#
Study
Tissue
Gene
h2
eQTL R2
model
# weights
model R2
model R2 P
eQTL GWAS Z
TWAS Z
TWAS P
Top SNP corr
PP3
PP4
joint
1
GTEx
Lung
TOMM7
0.25
0.19
enet
21
0.26
2.1e-20
-4.9
5.6
2.2e-08
-0.80
0.04
0.95
TRUE
2
GTEx
Thyroid
AC005682.5
0.23
0.13
lasso
7
0.16
3.0e-12
-4.9
-5.3
9.3e-08
0.59
0.04
0.96
FALSE
3
The Cancer Genome Atlas
Skin Cutaneous Melanoma
TOMM7
0.15
0.09
blup
63
0.08
4.0e-03
-4.9
5.2
2.6e-07
-0.84
0.01
0.76
FALSE