Best TWAS P=1.32e-09 · Best GWAS P=3.38e-12 conditioned to 1.06e-05
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | The Cancer Genome Atlas | Breast Invasive Carcinoma | LOC115110 | 0.01 | 0.01 | enet | 14 | 0.01 | 0.00052 | -4.7 | 6.1 | 1.4e-09 | -0.53 | 0.12 | 0.28 | TRUE |
| 2 | The Cancer Genome Atlas | Testicular Germ Cell Tumors | TNFRSF14 | 0.18 | 0.02 | blup | 52 | 0.10 | 0.00024 | -1.7 | -6.1 | 1.3e-09 | 0.61 | 0.01 | 0.56 | FALSE |