Best TWAS P=2.19e-12 · Best GWAS P=1.28e-12 conditioned to 0.0224
# | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | The Cancer Genome Atlas | Head and Neck Squamous Cell Carcinoma | ETV5 | 0.03 | 0.01 | blup | 55 | 0.02 | 0.0013 | -6.7 | -7 | 2.2e-12 | 0.83 | 0.01 | 0.84 | TRUE |