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Depressed Affect (Nagel 2018)
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chr3:135,806,811-136,715,468
Best TWAS P=1.06e-09 · Best GWAS P=2.55e-09 conditioned to 1
135.8M
136M
136.2M
136.4M
136.6M
0
2
4
6
8
physical position
-log10 P
Conditional
▼
Associated models
#
Study
Tissue
Gene
h2
eQTL R2
model
# weights
model R2
model R2 P
eQTL GWAS Z
TWAS Z
TWAS P
Top SNP corr
PP3
PP4
joint
1
The Cancer Genome Atlas
Head and Neck Squamous Cell Carcinoma
STAG1
0.04
0.02
lasso
3
0.02
0.0041
6
-6.1
1.1e-09
-0.95
0.01
0.98
TRUE