Best TWAS P=3.63e-08 · Best GWAS P=2.86e-08 conditioned to 1
# | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | GTEx | Skin Sun Exposed Lower leg | DLG2 | 0.14 | 0.12 | lasso | 3 | 0.12 | 9.8e-10 | 5.4 | 5.3 | 1.2e-07 | 0.90 | 0.02 | 0.98 | FALSE |
2 | GTEx | Skin Sun Exposed Lower leg | AP003026.1 | 0.04 | 0.04 | lasso | 2 | 0.03 | 2.1e-03 | 5.4 | 5.5 | 3.6e-08 | 0.95 | 0.03 | 0.92 | TRUE |