Best TWAS P=1.45e-07 · Best GWAS P=1.85e-07 conditioned to 0.127
# | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | GTEx | Artery Tibial | KIAA1875 | 0.13 | 0.05 | enet | 9 | 0.02 | 7.6e-03 | 4.9 | -5.3 | 1.4e-07 | -0.83 | 0.03 | 0.87 | TRUE |
2 | The Cancer Genome Atlas | Pancreatic Adenocarcinoma | KIAA1875 | 0.12 | 0.03 | blup | 13 | 0.10 | 4.1e-05 | 5.2 | -5.2 | 2.5e-07 | -0.90 | 0.01 | 0.94 | FALSE |