Best TWAS P=1.41e-17 · Best GWAS P=1.38e-15 conditioned to 0.424
# | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | NTR | Blood | LILRA3 | 0.30 | 0.34 | enet | 10 | 0.35 | 1.0e-116 | 8.0 | -8.2 | 3.3e-16 | -0.97 | 0.00 | 1.00 | FALSE |
2 | YFS | Blood | LILRA3 | 0.67 | 0.60 | bslmm | 410 | 0.72 | 0.0e+00 | 8.0 | -8.5 | 1.4e-17 | -0.89 | 0.00 | 1.00 | TRUE |
3 | YFS | Blood | LILRA5 | 0.20 | 0.06 | enet | 59 | 0.13 | 7.3e-41 | 7.2 | -5.5 | 4.8e-08 | -0.39 | 0.29 | 0.71 | FALSE |