[Hub]/) : Traits : Heel T-Score :

chr1:74,468,533-75,922,251

Best TWAS P=7.65e-10 · Best GWAS P=4.11e-09 conditioned to 1

Associated models

# Study Tissue Gene h2 eQTL R2 model # weights model R2 model R2 P eQTL GWAS Z TWAS Z TWAS P Top SNP corr PP3 PP4 joint
1 GTEx Adipose Subcutaneous CRYZ 0.64 0.31 lasso 13 0.47 3.1e-43 5.4 5.5 4.4e-08 -0.77 0.04 0.96 FALSE
2 GTEx Adipose Visceral Omentum CRYZ 0.51 0.21 enet 33 0.24 1.6e-12 5.5 5.1 2.7e-07 -0.58 0.04 0.96 FALSE
3 GTEx Brain Cerebellar Hemisphere TYW3 0.32 0.20 lasso 13 0.18 2.2e-05 -5.9 6.2 7.7e-10 -0.97 0.01 0.97 TRUE
4 GTEx Brain Cerebellar Hemisphere RP11-17E13.2 0.25 0.12 lasso 6 0.04 4.4e-02 -5.9 5.9 3.1e-09 -0.97 0.01 0.95 FALSE
5 GTEx Brain Cerebellum CRYZ 0.49 0.17 enet 20 0.17 1.2e-05 5.5 5.4 8.6e-08 -0.52 0.03 0.88 FALSE
6 GTEx Brain Cerebellum TYW3 0.34 0.23 enet 18 0.27 1.4e-08 5.5 5.7 1.0e-08 -0.91 0.01 0.99 FALSE
7 GTEx Brain Cerebellum RP11-17E13.2 0.28 0.11 enet 24 0.09 1.6e-03 5.5 5.2 2.2e-07 -0.87 0.02 0.97 FALSE
8 GTEx Brain Cortex CRYZ 0.46 0.14 lasso 5 0.14 1.4e-04 5.2 6.0 2.7e-09 -0.45 0.04 0.60 FALSE
9 GTEx Brain Cortex TYW3 0.34 0.18 lasso 5 0.15 6.4e-05 4.8 5.5 4.7e-08 -0.73 0.05 0.90 FALSE
10 GTEx Brain Frontal Cortex BA9 TYW3 0.26 0.20 lasso 13 0.18 1.3e-05 5.5 5.5 3.0e-08 -0.66 0.04 0.92 FALSE
11 GTEx Brain Hypothalamus RP11-17E13.2 0.29 0.21 enet 15 0.27 4.6e-07 4.8 5.3 1.0e-07 -0.85 0.02 0.96 FALSE
12 GTEx Brain Nucleus accumbens basal ganglia RP11-17E13.2 0.40 0.26 lasso 7 0.31 4.6e-09 5.1 5.6 2.1e-08 -0.71 0.05 0.94 FALSE
13 GTEx Brain Putamen basal ganglia RP11-17E13.2 0.43 0.10 lasso 8 0.14 3.5e-04 4.8 5.5 3.5e-08 -0.83 0.04 0.89 FALSE
14 GTEx Breast Mammary Tissue (Female) CRYZ 0.27 0.12 lasso 7 0.08 1.6e-03 5.2 5.4 5.5e-08 -0.63 0.03 0.79 FALSE
15 GTEx Heart Left Ventricle RP11-17E13.2 0.30 0.20 lasso 5 0.23 2.2e-12 5.5 5.2 2.0e-07 -0.88 0.02 0.98 FALSE
16 GTEx Nerve Tibial RP11-17E13.2 0.37 0.24 lasso 5 0.31 4.3e-22 4.8 5.2 2.1e-07 -0.89 0.03 0.97 FALSE
17 GTEx Ovary RP11-17E13.2 0.34 0.20 lasso 14 0.18 3.0e-05 4.9 5.9 3.5e-09 -0.88 0.02 0.96 FALSE
18 GTEx Skin Not Sun Exposed Suprapubic CRYZ 0.61 0.17 lasso 11 0.43 2.4e-25 5.5 5.2 2.5e-07 -0.75 0.03 0.97 FALSE
19 GTEx Skin Sun Exposed Lower leg CRYZ 0.54 0.25 enet 20 0.50 2.0e-46 -5.9 5.2 1.5e-07 -0.79 0.00 1.00 FALSE
20 GTEx Whole Blood CRYZ 0.19 0.10 lasso 5 0.13 6.4e-12 4.8 5.2 2.4e-07 -0.72 0.07 0.92 FALSE
21 METSIM Adipose CRYZ 0.31 0.17 enet 36 0.24 3.9e-35 5.1 5.9 4.3e-09 -0.72 0.04 0.96 FALSE
22 METSIM Adipose RP11-17E13.2 0.14 0.10 lasso 15 0.17 2.9e-24 -3.2 5.4 7.9e-08 -0.84 0.01 0.99 FALSE
23 NTR Blood CRYZ 0.07 0.01 lasso 4 0.03 3.1e-09 -5.8 5.9 2.9e-09 -0.85 0.01 0.99 FALSE
24 The Cancer Genome Atlas Glioblastoma Multiforme CRYZ 0.55 0.33 lasso 6 0.41 1.6e-13 4.9 5.3 1.2e-07 -0.69 0.02 0.98 FALSE
25 The Cancer Genome Atlas Head and Neck Squamous Cell Carcinoma CRYZ 0.39 0.29 enet 13 0.38 3.5e-45 4.9 5.3 1.1e-07 -0.79 0.02 0.98 FALSE
26 The Cancer Genome Atlas Rectum Adenocarcinoma CRYZ 0.21 0.04 blup 54 0.04 4.9e-02 4.9 5.8 6.8e-09 -0.59 0.01 0.67 FALSE