Best TWAS P=3e-09 · Best GWAS P=3.74e-15 conditioned to 2.14e-11
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | GTEx | Nerve Tibial | RP11-634H22.1 | 0.15 | 0.04 | lasso | 5 | 0.08 | 2.6e-06 | -4.6 | -5.9 | 3.0e-09 | -0.10 | 0.84 | 0.01 | TRUE |
| 2 | The Cancer Genome Atlas | Kidney Renal Papillary Cell Carcinoma | KIAA1549 | 0.12 | 0.07 | blup | 117 | 0.06 | 3.2e-04 | -4.3 | 5.2 | 1.8e-07 | -0.65 | 0.07 | 0.50 | TRUE |