Best TWAS P=9.06e-12 · Best GWAS P=4.36e-13 conditioned to 1
# | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | GTEx | Artery Tibial | RP4-800G7.2 | 0.45 | 0.09 | enet | 16 | 0.21 | 1.3e-16 | -7.2 | -5.2 | 2.0e-07 | 0.73 | 0 | 1 | FALSE |
2 | GTEx | Esophagus Mucosa | RP4-800G7.2 | 0.19 | 0.16 | lasso | 2 | 0.14 | 1.2e-09 | -7.2 | -6.8 | 9.1e-12 | 0.99 | 0 | 1 | TRUE |
3 | GTEx | Muscle Skeletal | RP4-800G7.2 | 0.30 | 0.04 | lasso | 6 | 0.07 | 1.8e-07 | -7.2 | -6.0 | 2.5e-09 | 0.92 | 0 | 1 | FALSE |