Best TWAS P=2.87e-24 · Best GWAS P=8.96e-39 conditioned to 1.41e-16
# | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | GTEx | Adrenal Gland | CMIP | 0.23 | 0.04 | lasso | 8 | 0.05 | 0.0082 | 2.759 | 6.7 | 2.0e-11 | -0.52 | 0.09 | 0.54 | FALSE |
2 | The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | CMIP | 0.07 | 0.00 | blup | 242 | 0.01 | 0.0096 | -0.089 | -10.2 | 2.9e-24 | 0.69 | 0.03 | 0.32 | TRUE |