Best TWAS P=2.48e-14 · Best GWAS P=8.39e-15 conditioned to 0.0016
# | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | GTEx | Skin Sun Exposed Lower leg | RP11-254F7.2 | 0.21 | 0.10 | enet | 11 | 0.17 | 6.3e-14 | -7.7 | 5.5 | 3.8e-08 | -0.88 | 0.00 | 1.00 | FALSE |
2 | ROSMAP | Brain Pre-frontal Cortex | RP11-254F7.2 | 0.35 | 0.21 | bslmm | 562 | 0.30 | 1.4e-39 | -7.1 | -7.6 | 2.5e-14 | 0.74 | 0.01 | 0.99 | TRUE |