Best TWAS P=4.55e-08 · Best GWAS P=6.6e-08 conditioned to 1
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | CommonMind | Brain Pre-frontal Cortex | HDLBP | 0.08 | 0.03 | blup | 411 | 0.04 | 9.2e-06 | -4.8 | 5.3 | 1.1e-07 | -0.64 | 0.04 | 0.94 | FALSE |
| 2 | GTEx | Brain Cerebellar Hemisphere | HDLBP | 0.29 | 0.09 | lasso | 7 | 0.10 | 1.2e-03 | -5.4 | 5.3 | 1.2e-07 | -0.93 | 0.01 | 0.93 | FALSE |
| 3 | GTEx | Brain Cerebellum | HDLBP | 0.26 | 0.20 | lasso | 7 | 0.22 | 5.1e-07 | -4.8 | 5.4 | 7.7e-08 | -0.93 | 0.01 | 0.99 | FALSE |
| 4 | YFS | Blood | STK25 | 0.05 | 0.03 | lasso | 4 | 0.03 | 5.5e-11 | -5.4 | 5.5 | 4.5e-08 | -0.97 | 0.00 | 1.00 | TRUE |