Best TWAS P=4.71e-08 · Best GWAS P=3.54e-07 conditioned to 0.211
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | GTEx | Stomach | TFB1M | 0.19 | 0.09 | enet | 14 | 0.09 | 2.8e-05 | -4.6 | -5.3 | 1.5e-07 | 0.77 | 0.02 | 0.97 | FALSE |
| 2 | The Cancer Genome Atlas | Cervical Squamous Cell Carcinoma | TFB1M | 0.14 | 0.10 | enet | 8 | 0.09 | 5.1e-05 | -4.5 | -5.5 | 4.7e-08 | 0.79 | 0.02 | 0.96 | TRUE |
| 3 | The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | TFB1M | 0.05 | 0.03 | blup | 96 | 0.02 | 7.9e-04 | -5.0 | -5.4 | 5.3e-08 | 0.73 | 0.02 | 0.96 | FALSE |