Best TWAS P=2.87e-08 · Best GWAS P=2.2e-06 conditioned to 0.114
# | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | The Cancer Genome Atlas | Head and Neck Squamous Cell Carcinoma | NDST3 | 0.02 | 0.01 | blup | 107 | 0.02 | 0.006 | 4.4 | -5.5 | 2.9e-08 | -0.63 | 0.02 | 0.6 | TRUE |