TWAS
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About
Usage
Models
Genes
Traits
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Traits
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Blood Red Count
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chr6:6,570,107-8,046,602
Best TWAS P=6.74e-14 · Best GWAS P=7.42e-31 conditioned to 3.45e-19
6.6M
6.8M
7M
7.2M
7.4M
7.6M
7.8M
8M
0
5
10
15
20
25
30
physical position
-log10 P
Marginal
▼
Associated models
#
Study
Tissue
Gene
h2
eQTL R2
model
# weights
model R2
model R2 P
eQTL GWAS Z
TWAS Z
TWAS P
Top SNP corr
PP3
PP4
joint
2
GTEx
Cells Transformed fibroblasts
RP11-69L16.4
0.15
0.06
lasso
4
0.07
4.6e-06
7.7
-7.5
6.7e-14
-0.52
0.94
0.01
TRUE
1
GTEx
Cells Transformed fibroblasts
SSR1
0.14
0.10
lasso
5
0.12
4.2e-09
7.7
-7.5
8.0e-14
-0.52
1.00
0.00
FALSE