TWAS
hub
About
Usage
Models
Genes
Traits
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Traits
:
Blood Red Count
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chr12:116,881,724-118,326,404
Best TWAS P=1.93e-08 · Best GWAS P=1.73e-09 conditioned to 1
116.8M
117M
117.2M
117.4M
117.6M
117.8M
118M
118.2M
118.4M
0
2
4
6
8
physical position
-log10 P
Conditional
▼
Associated models
#
Study
Tissue
Gene
h2
eQTL R2
model
# weights
model R2
model R2 P
eQTL GWAS Z
TWAS Z
TWAS P
Top SNP corr
PP3
PP4
joint
1
GTEx
Muscle Skeletal
FBXO21
0.17
0.13
lasso
10
0.14
1.0e-13
-5.9
5.6
1.9e-08
-0.95
0.01
0.99
TRUE
3
The Cancer Genome Atlas
Prostate Adenocarcinoma
FBXO21
0.03
0.03
blup
55
0.02
2.0e-03
-4.9
5.4
5.4e-08
-0.82
0.03
0.76
FALSE
2
GTEx
Nerve Tibial
FBXO21
0.26
0.17
lasso
4
0.16
1.7e-11
-5.5
5.3
9.1e-08
-0.57
0.12
0.88
FALSE