TWAS
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Usage
Models
Genes
Traits
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Traits
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Blood Red Count
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chr12:131,921,121-133,699,101
Best TWAS P=1.87e-23 · Best GWAS P=6.26e-27 conditioned to 1.02e-06
132M
132.2M
132.4M
132.6M
132.8M
133M
133.2M
133.4M
133.6M
133.8M
0
5
10
15
20
25
physical position
-log10 P
Conditional
▼
Associated models
#
Study
Tissue
Gene
h2
eQTL R2
model
# weights
model R2
model R2 P
eQTL GWAS Z
TWAS Z
TWAS P
Top SNP corr
PP3
PP4
joint
1
GTEx
Cells EBV-transformed lymphocytes
FBRSL1
0.35
0.07
lasso
7
0.09
6.1e-04
8.7
-10.0
1.9e-23
-0.61
0.01
0.86
TRUE
2
GTEx
Nerve Tibial
RP13-977J11.5
0.22
0.00
enet
26
0.03
1.7e-03
3.1
5.3
1.3e-07
0.16
0.05
0.10
TRUE
3
GTEx
Pancreas
FBRSL1
0.49
0.38
lasso
5
0.36
3.2e-16
8.7
9.8
8.1e-23
0.82
0.08
0.92
FALSE
4
METSIM
Adipose
FBRSL1
0.09
0.01
blup
286
0.03
1.7e-05
-7.8
-7.6
2.2e-14
-0.15
0.56
0.02
FALSE