TWAS
hub
About
Usage
Models
Genes
Traits
[Hub]/) :
Traits
:
Blood Red Count
:
←
→
chr2:159,964,516-161,456,847
Best TWAS P=1.65e-07 · Best GWAS P=1.86e-12 conditioned to 2.41e-06
160M
160.2M
160.4M
160.6M
160.8M
161M
161.2M
161.4M
0
2
4
6
8
10
12
physical position
-log10 P
Marginal
▼
Associated models
#
Study
Tissue
Gene
h2
eQTL R2
model
# weights
model R2
model R2 P
eQTL GWAS Z
TWAS Z
TWAS P
Top SNP corr
PP3
PP4
joint
1
GTEx
Colon Transverse
LY75
0.16
0.13
lasso
4
0.16
8.1e-08
-5.5
-5.2
1.7e-07
-0.73
0.52
0.48
TRUE
2
GTEx
Uterus
LY75
0.24
0.23
lasso
5
0.23
1.5e-05
4.4
-5.2
1.8e-07
-0.63
0.27
0.09
FALSE
3
The Cancer Genome Atlas
Head and Neck Squamous Cell Carcinoma
LY75
0.05
0.08
lasso
3
0.07
1.0e-08
5.2
-5.2
2.1e-07
-0.69
0.97
0.02
FALSE