Best TWAS P=8.09e-09 · Best GWAS P=8.94e-08 conditioned to 0.0236
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | CommonMind | Brain Pre-frontal Cortex | IPO11 | 0.07 | 0.03 | lasso | 6 | 0.08 | 1.3e-09 | -3.6 | -5.8 | 8.1e-09 | -0.62 | 0.10 | 0.89 | TRUE |
| 2 | The Cancer Genome Atlas | Prostate Adenocarcinoma | IPO11 | 0.03 | 0.00 | blup | 127 | 0.01 | 3.0e-02 | -4.1 | -5.5 | 2.9e-08 | -0.56 | 0.03 | 0.34 | FALSE |