TWAS
hub
About
Usage
Models
Genes
Traits
[Hub]/) :
Traits
:
Schizophrenia (2014)
:
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chr4:169,845,720-171,339,965
Best TWAS P=3.68e-08 · Best GWAS P=3.65e-08 conditioned to 1
169.8M
170M
170.2M
170.4M
170.6M
170.8M
171M
171.2M
171.4M
0
2
4
6
physical position
-log10 P
Conditional
▼
Associated models
#
Study
Tissue
Gene
h2
eQTL R2
model
# weights
model R2
model R2 P
eQTL GWAS Z
TWAS Z
TWAS P
Top SNP corr
PP3
PP4
joint
1
CommonMind
Brain Pre-frontal Cortex
CLCN3
0.04
0.04
enet
10
0.03
0.00041
5.4
5.5
3.7e-08
0.99
0.01
0.99
TRUE
2
The Cancer Genome Atlas
Kidney Renal Clear Cell Carcinoma
CLCN3
0.04
0.03
enet
7
0.02
0.00103
5.1
5.4
6.8e-08
0.86
0.01
0.98
FALSE