Best TWAS P=4.65e-12 · Best GWAS P=3.16e-06 conditioned to 0.298
# | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | The Cancer Genome Atlas | Prostate Adenocarcinoma | KIAA0319 | 0.08 | 0.01 | blup | 140 | 0.01 | 2.5e-02 | -4.6 | -6.9 | 4.6e-12 | 0.55 | 0.05 | 0.85 | TRUE |
2 | The Cancer Genome Atlas | Prostate Adenocarcinoma | TDP2 | 0.19 | 0.02 | blup | 69 | 0.08 | 5.1e-09 | -5.9 | -5.2 | 2.1e-07 | 0.50 | 0.00 | 1.00 | FALSE |