Best TWAS P=3.16e-08 · Best GWAS P=9.03e-09 conditioned to 9.61e-05
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | CommonMind | Brain Pre-frontal Cortex | CAB39L | 0.35 | 0.24 | enet | 30 | 0.32 | 4.2e-39 | 4.6 | -5.5 | 3.4e-08 | -0.69 | 0.59 | 0.40 | FALSE |
| 2 | GTEx | Brain Cortex | CAB39L | 0.40 | 0.15 | lasso | 4 | 0.04 | 3.0e-02 | 5.2 | -5.5 | 3.2e-08 | -0.39 | 0.07 | 0.58 | TRUE |