TWAS
hub
About
Usage
Models
Genes
Traits
[Hub]/) :
Traits
:
Comparative height size at age 10
:
←
→
chr2:183,084,726-184,769,427
Best TWAS P=1.46e-09 · Best GWAS P=3.45e-10 conditioned to 1.83e-08
183M
183.2M
183.4M
183.6M
183.8M
184M
184.2M
184.4M
184.6M
184.8M
0
2
4
6
8
10
physical position
-log10 P
Marginal
▼
Associated models
#
Study
Tissue
Gene
h2
eQTL R2
model
# weights
model R2
model R2 P
eQTL GWAS Z
TWAS Z
TWAS P
Top SNP corr
PP3
PP4
joint
2
GTEx
Liver
NCKAP1
0.50
-0.01
lasso
10
0.01
0.14300
4.2
6.0
1.5e-09
0.11
0.05
0.08
TRUE
1
GTEx
Brain Cortex
RP11-438L19.1
0.33
0.02
enet
62
0.12
0.00033
4.9
-5.3
9.5e-08
0.08
0.06
0.08
FALSE