Best TWAS P=6.97e-08 · Best GWAS P=1.83e-08 conditioned to 0.0542
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | GTEx | Testis | C1GALT1 | 0.56 | 0.32 | lasso | 8 | 0.48 | 5.4e-24 | 4.6 | 5.4 | 7.0e-08 | 0.86 | 0.01 | 0.99 | TRUE |
| 2 | The Cancer Genome Atlas | Breast Invasive Carcinoma | C1GALT1 | 0.02 | 0.01 | lasso | 4 | 0.01 | 1.7e-02 | 5.6 | 5.3 | 1.5e-07 | 0.93 | 0.00 | 0.98 | FALSE |