Best TWAS P=2.66e-09 · Best GWAS P=6.07e-11 conditioned to 0.0477
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | GTEx | Prostate | CSGALNACT1 | 0.29 | 0.17 | enet | 9 | 0.15 | 0.00014 | 4.7 | 6.0 | 2.7e-09 | -0.32 | 0.04 | 0.93 | TRUE |
| 2 | The Cancer Genome Atlas | Brain Lower Grade Glioma | CSGALNACT1 | 0.09 | 0.01 | blup | 331 | 0.03 | 0.00026 | 4.6 | -5.9 | 4.1e-09 | 0.52 | 0.09 | 0.62 | TRUE |