Best TWAS P=5.81e-08 · Best GWAS P=5.2e-10 conditioned to 9.93e-05
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | CommonMind | Brain Pre-frontal Cortex | C6orf165 | 0.19 | 0.24 | lasso | 4 | 0.24 | 2.9e-29 | -5.0 | -5.2 | 2.2e-07 | 0.67 | 0.67 | 0.33 | FALSE |
| 2 | The Cancer Genome Atlas | Breast Invasive Carcinoma | C6orf163 | 0.10 | 0.04 | blup | 65 | 0.04 | 2.6e-09 | -4.5 | 5.4 | 5.8e-08 | -0.54 | 0.01 | 0.95 | TRUE |