Best TWAS P=1.39e-07 · Best GWAS P=1.75e-07 conditioned to 1
# | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | GTEx | Cells EBV-transformed lymphocytes | CCS | 0.21 | 0.24 | enet | 11 | 0.21 | 2.0e-07 | -5.2 | 5.2 | 2.0e-07 | -1.00 | 0.01 | 0.99 | FALSE |
2 | NTR | Blood | CCS | 0.03 | 0.04 | lasso | 2 | 0.04 | 1.2e-11 | -5.2 | 5.3 | 1.4e-07 | -0.99 | 0.01 | 0.99 | TRUE |