Best TWAS P=1.01e-08 · Best GWAS P=1.82e-07 conditioned to 0.295
# | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | GTEx | Lung | C19orf38 | 0.07 | 0.04 | lasso | 2 | 0.03 | 0.0026 | 5.2 | -5.2 | 2e-07 | -1.0 | 0.00 | 0.98 | FALSE |
2 | GTEx | Pituitary | CDC37 | 0.23 | 0.11 | lasso | 5 | 0.05 | 0.0226 | 5.0 | 5.7 | 1e-08 | 0.8 | 0.01 | 0.89 | TRUE |